BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008H11LP1|AL425949
(832 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1221 1623 0.0
>3x_Contig1221
Length = 4893
Score = 1623 bits (818), Expect = 0.0
Identities = 828/832 (99%)
Strand = Plus / Plus
Query: 1 gatcgagagcttccgttttgtcccatgagagtstattgttccagatgacgttggctatgg 60
|||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 3163 gatcgagagcatccgttttgtcccatgaaagtctattgttccagatgacgttggctatgg 3222
Query: 61 atgcataaacttcttctagtttctctactgtgaagttttgtgtatttttttccagagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3223 atgcataaacttcttctagtttctctactgtgaagttttgtgtatttttttccagagcag 3282
Query: 121 agatcaaagagagagctctagattcatcgtagacgaattctggttctggttctaattctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3283 agatcaaagagagagctctagattcatcgtagacgaattctggttctggttctaattctg 3342
Query: 181 actctggttctgactctggttctggttctgattgagcttctggttctacttcagcttcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3343 actctggttctgactctggttctggttctgattgagcttctggttctacttcagcttcag 3402
Query: 241 tgacgctcggtggttgcttttcctgctccttattagttgcatcttcagtatcaacagtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3403 tgacgctcggtggttgcttttcctgctccttattagttgcatcttcagtatcaacagtta 3462
Query: 301 aatgcgaattattgtgactagtctgagcaaagccattttccgcattggtaagcctgctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3463 aatgcgaattattgtgactagtctgagcaaagccattttccgcattggtaagcctgctct 3522
Query: 361 ccgaataatcttgaacagtgtccgtttttgccaaatcagcatcattggttccaaagttca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3523 ccgaataatcttgaacagtgtccgtttttgccaaatcagcatcattggttccaaagttca 3582
Query: 421 caggctgtgttgtgaatggctctacttgagacgtttcacctagatctagtgtacccgcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3583 caggctgtgttgtgaatggctctacttgagacgtttcacctagatctagtgtacccgcat 3642
Query: 481 ctaattgagcctgagactgcacttggtttcctgaggcggtagttagttcaactgtagcga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3643 ctaattgagcctgagactgcacttggtttcctgaggcggtagttagttcaactgtagcga 3702
Query: 541 tcgaatcagtttgagttggattgttctgcaaaagtatttgttgttccttatccactcgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3703 tcgaatcagtttgagttggattgttctgcaaaagtatttgttgttccttatccactcgtt 3762
Query: 601 cacttttttcctttataaataattcttgtcttagaagttctctttggcgtgtggctttgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3763 cacttttttcctttataaataattcttgtcttagaagttctctttggcgtgtggctttgc 3822
Query: 661 attctgcaacaaattctggttgcgagatatcttcgatgccgacttgtgcattagcaaaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3823 attctgcaacaaattctggttgcgagatatcttcgatgccgacttgtgcattagcaaaca 3882
Query: 721 tttcagatgcctttattactctttctctgtccgctgatgtggtagcatcaagataaatca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3883 tttcagatgcctttattactctttctctgtccgctgatgtggtagcatcaagataaatca 3942
Query: 781 actcgatatcttttaggaattgtttcggctcagagttataaccattccataa 832
|||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3943 actcgatatcttttaggaattgtttcggctcagagtaataaccattccataa 3994
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5920
Number of Sequences: 1807
Number of extensions: 5920
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 1
length of query: 832
length of database: 10,358,551
effective HSP length: 16
effective length of query: 816
effective length of database: 10,329,639
effective search space: 8428985424
effective search space used: 8428985424
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)